#include <xsh_dfs.h>
#include <xsh_pfits.h>
#include <xsh_data_pre.h>
#include <xsh_data_pre_3d.h>
#include <xsh_error.h>
#include <xsh_msg.h>
#include <cpl.h>
#include <string.h>
#include <time.h>
#include <math.h>
#include <xsh_paf_save.h>
#include <xsh_utils_table.h>
#include <xsh_utils.h>
#include <xsh_data_spectrum.h>
Go to the source code of this file.
Functions | |
xsh_file_exists | |
static cpl_frame * | xsh_find_frame (cpl_frameset *frames, const char *tags[]) |
Find a frame. | |
int | xsh_file_exists (const char *filename) |
cpl_frameset * | xsh_frameset_extract (const cpl_frameset *frames, const char *tag) |
Extract frames with given tag from frameset. | |
cpl_error_code | xsh_frameset_merge (cpl_frameset *set1, cpl_frameset *set2) |
Extracts raw frames. | |
xsh_instrument * | xsh_dfs_set_groups (cpl_frameset *set) |
Set the group as RAW or CALIB in a frameset and return the instrument detected. | |
cpl_error_code | xsh_dfs_extract_raw_frames (cpl_frameset *input, cpl_frameset *raws) |
split input sof in groups: raw and calib | |
cpl_error_code | xsh_dfs_extract_calib_frames (cpl_frameset *input, cpl_frameset *calib) |
split input sof in groups: raw and calib | |
cpl_error_code | xsh_dfs_extract_pro_frames (cpl_frameset *input, cpl_frameset *pros) |
split input sof in groups: raw and calib | |
void | xsh_dfs_split_in_group (cpl_frameset *input, cpl_frameset *raws, cpl_frameset *calib) |
split input sof in groups: raw and calib | |
void | xsh_dfs_split_qth_d2 (cpl_frameset *input, cpl_frameset **qth, cpl_frameset **d2) |
Extracts QTH and D2 frames from input frameset. | |
void | xsh_dfs_split_nir (cpl_frameset *input, cpl_frameset **on, cpl_frameset **off) |
split input RAW NIR sof in ON and OFF | |
int | xsh_dfs_split_offset (cpl_frameset *input, const char *object_tag, const char *sky_tag, cpl_frameset **object, cpl_frameset **sky) |
split input RAW offset sof in OBJECT_... and SKY_... framesets | |
static bool | xsh_dfs_tag_check (const char *tag, const char *tag_list[], int size) |
check if the tag is in the tag list | |
void | xsh_dfs_filter (cpl_frameset *set, const char *tags[], int size) |
filter the frameset with the given tag list | |
cpl_frameset * | xsh_frameset_extract_pre (cpl_frameset *frameset, const char *prefix) |
Extracts pre frames from a frameset. | |
cpl_frame * | xsh_find_bpmap (cpl_frameset *set) |
find the bad pixel map in a set of files | |
cpl_frame * | xsh_find_master_bpmap (cpl_frameset *set) |
find the master bad pixel map in a set of files | |
cpl_frame * | xsh_find_off (cpl_frameset *set) |
find the off frame in set of files | |
cpl_frame * | xsh_find_on (cpl_frameset *set) |
find the on frame in set of files | |
void | xsh_dfs_find_flat (cpl_frameset *raws, cpl_frameset *flat) |
find the flat set of files in the input SOF and detect the mode of instrument. This function assure that all flat files have the same tag | |
char * | xsh_unique_filename (const char *context, const char *caller_id, const char *pro_catg) |
Get unique product filename. | |
void | xsh_add_product (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instrument, const char *final_prefix, const char *type) |
void | xsh_add_product_spectrum (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instr) |
void | xsh_add_product_pre (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instr) |
Add DFS keywords to a product frame. | |
void | xsh_add_product_pre_3d (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instr) |
Add 3d product frame. | |
void | xsh_add_product_bpmap (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instrument, const char *final_prefix) |
void | xsh_add_product_imagelist (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instrument, const char *final_prefix) |
void | xsh_add_product_image (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instrument, const char *final_prefix) |
void | xsh_add_product_table_multi (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instrument) |
Save Table product (input frame has several extensions, 1 table per extension). | |
void | xsh_add_product_table (cpl_frame *frame, cpl_frameset *frameset, const cpl_parameterlist *parameters, const char *recipe_id, xsh_instrument *instrument) |
Save Table product. | |
cpl_frame * | xsh_find_std_flux (cpl_frameset *frames) |
Find standard star frame. | |
cpl_frame * | xsh_find_std_star_flux (cpl_frameset *frames) |
Find standard standard star flux frame. | |
cpl_frame * | xsh_find_master_bias (cpl_frameset *frames, xsh_instrument *instr) |
Find master bias frame. | |
cpl_frame * | xsh_find_frame_with_tag (cpl_frameset *frames, const char *tag, xsh_instrument *instr) |
Find frame with a given tag. | |
char * | xsh_get_tag_from_arm (const char *tag, xsh_instrument *instr) |
Find arm specific tag from base and instrument setting. | |
cpl_frame * | xsh_find_master_dark (cpl_frameset *frames, xsh_instrument *instr) |
Find master dark frame. | |
cpl_frame * | xsh_find_master_flat (cpl_frameset *frames, xsh_instrument *instr) |
Find master flat frame. | |
cpl_frame * | xsh_find_theo_tab_sing (cpl_frameset *frames, xsh_instrument *instr) |
Find a theoretical tab signle pinhole in SOF. | |
cpl_frame * | xsh_find_theo_tab_mult (cpl_frameset *frames, xsh_instrument *instr) |
Find a theoretical tab multi pinhole in SOF. | |
cpl_frame * | xsh_find_theo_tab_mode (cpl_frameset *frames, xsh_instrument *instr) |
Find a theoretical tab IFU or SINg depending of MODE in SOF. | |
cpl_frame * | xsh_find_order_tab_recov (cpl_frameset *frames, xsh_instrument *instr) |
Find an order tab RECOV. | |
cpl_frame * | xsh_find_order_tab_guess (cpl_frameset *frames, xsh_instrument *instr) |
Find an order tab GUESS. | |
cpl_frame * | xsh_find_order_tab_centr (cpl_frameset *frames, xsh_instrument *instr) |
Find an order tab CENTR. | |
cpl_frame * | xsh_find_order_tab_edges (cpl_frameset *frames, xsh_instrument *instr) |
Find an order tab EDGES. | |
cpl_frame * | xsh_find_wave_tab_guess (cpl_frameset *frames, xsh_instrument *instr) |
Find a wave tab guess. | |
cpl_frame * | xsh_find_wave_tab_2d (cpl_frameset *frames, xsh_instrument *instr) |
Find a wave tab 2D. | |
cpl_frame * | xsh_find_slitmap (cpl_frameset *frames, xsh_instrument *instr) |
Find a slit map. | |
cpl_frame * | xsh_find_wave_tab (cpl_frameset *frames, xsh_instrument *instr) |
Find a wave tab 2D or a wave tab ARC. | |
cpl_frame * | xsh_find_model_config (cpl_frameset *frames, xsh_instrument *instr) |
Find a model config. | |
cpl_frameset * | xsh_find_wave_tab_ifu (cpl_frameset *frames, xsh_instrument *instrument) |
Find wave tab ARC (for IFU 3 frames). | |
cpl_frame * | xsh_find_arc_line_list_clean (cpl_frameset *frames, xsh_instrument *instr) |
Find an arc lines list clean frame. | |
cpl_frame * | xsh_find_arc_line_list (cpl_frameset *frames, xsh_instrument *instr) |
Find an arc line list frame. | |
cpl_frame * | xsh_find_usr_lines_guess_tab (cpl_frameset *frames, xsh_instrument *instr) |
Find a user guess line positions table frame. | |
cpl_frame * | xsh_find_model_config_tab (cpl_frameset *frames, xsh_instrument *instr) |
Find a model configuration table frame. | |
cpl_frame * | xsh_find_wavemap (cpl_frameset *frames, xsh_instrument *instr) |
Find Wave Map frame. The frame returned should not be free by the caller. | |
cpl_frame * | xsh_find_raw_orderdef_vis_uvb (cpl_frameset *frames) |
Find orderdef raw frame for UVB or VIS. | |
cpl_frame * | xsh_find_raw_orderdef_nir (cpl_frameset *frames) |
Find orderdef raw frame for NIR. | |
cpl_frame * | xsh_find_disp_tab (cpl_frameset *frames, xsh_instrument *instr) |
Find Dispersol tab frame. The frame returned should not be free by the caller. | |
cpl_frame * | xsh_find_raw_orderdef_nir_off (cpl_frameset *frames) |
Find orderdef raw frame for NIR OFF. | |
cpl_frame * | xsh_find_raw_arc_slit_uvb_vis (cpl_frameset *frames, XSH_ARM arm) |
Find raw frame for Slit UVB/VIS. | |
cpl_frame * | xsh_find_raw_arc_slit_nir_on (cpl_frameset *frames) |
Find raw frame for Slit NIR ON. | |
cpl_frame * | xsh_find_raw_arc_slit_nir_off (cpl_frameset *frames) |
Find raw frame for Slit NIR OFF. | |
cpl_frame * | xsh_find_calpro_model_config (cpl_frameset *frames, xsh_instrument *instr) |
Find model config frame. | |
cpl_frame * | xsh_find_model_config_open (cpl_frameset *frames, xsh_instrument *instr) |
Find model config frame. | |
cpl_frame * | xsh_find_calpro_model_meas_coord (cpl_frameset *frames, xsh_instrument *instr) |
Find model config frame. | |
cpl_frame * | xsh_find_model_wavelist (cpl_frameset *frames, xsh_instrument *instr) |
Find model wavelength list frame. | |
cpl_frame * | xsh_find_model_testpar (cpl_frameset *frames, xsh_instrument *instr) |
Find model test parameter list. | |
cpl_frame * | xsh_find_spectral_format (cpl_frameset *frames, xsh_instrument *instr) |
Find spectral format frame. | |
int | xsh_parameter_get_default_flag (const cpl_parameter *p) |
Check if an input parameter has been changed by the user. | |
cpl_error_code | xsh_validate_model_cfg (cpl_frame *mod, cpl_frameset *set) |
Validate model cfg. | |
cpl_frameset * | xsh_frameset_ext_table_frames (cpl_frameset *set) |
Extract frameset sub set containing only table frames. | |
int | xsh_dfs_files_dont_exist (cpl_frameset *frameset) |
Check if all SOF files exist. | |
cpl_frameset * | xsh_frameset_ext_image_frames (cpl_frameset *set) |
Extract frameset sub set containing only table frames. | |
cpl_frameset * | xsh_frameset_drl_frames (cpl_frameset *set) |
extract DRL specific frames from frameset | |
cpl_error_code | xsh_ensure_raws_input_offset_recipe_is_proper (cpl_frameset *raws, xsh_instrument *instrument) |
Make sure input frames is an even number (eventually removes the last from the input list). | |
static double | xsh_get_offsety (cpl_propertylist *plist) |
Computes offsety. | |
cpl_frameset * | xsh_frameset_extract_offsety_matches (cpl_frameset *raws, const double offset) |
Extract frames that has same cumoffy as offset. | |
cpl_frameset * | xsh_frameset_extract_offsety_mismatches (cpl_frameset *raws, const double offset) |
Extract frames that has different cumoffy than offset. | |
cpl_frameset * | xsh_extract_nod_pairs (cpl_frameset *raws, cpl_vector *offset) |
Make sure input frames is composed by nod a-b sequence. | |
cpl_frameset * | xsh_extract_obj_and_sky_pairs (cpl_frameset *raws, xsh_instrument *instrument) |
Make sure input frames is composed by obj-sky pairs. | |
cpl_error_code | xsh_ensure_raws_number_is_even (cpl_frameset *raws) |
Make sure input frames is an even number (eventually removes the last from the input list). | |
int | xsh_print_rec_status (const int val) |
Check if an error has happened and returns error kind and location. | |
void | xsh_frame_config (const char *fname, const char *tag, cpl_frame_type type, cpl_frame_group group, cpl_frame_level level, cpl_frame **frame) |
Define a frame characteristics. | |
cpl_frame * | xsh_frame_product (const char *fname, const char *tag, cpl_frame_type type, cpl_frame_group group, cpl_frame_level level) |
Creates a frame with given characteristics. |
void xsh_add_product | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instrument, | |||
const char * | final_prefix, | |||
const char * | type | |||
) |
Save product
frame | Product Frame | |
frameset | Input Frameset | |
parameters | Parameters list | |
recipe_id | Recipe Identification String | |
instrument | Instrument structure | |
final_prefix | Final file name | |
type | of frame (image/imagelist/table) |
Definition at line 1605 of file xsh_dfs.c.
References check, check_msg, xsh_instrument::dictionary, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, xsh_frame_product(), XSH_FREE, xsh_free_image(), xsh_free_imagelist(), xsh_free_propertylist(), xsh_free_table(), xsh_msg_dbg_low, xsh_msg_error, XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_stringcat_any(), and xsh_time_stamp_get().
void xsh_add_product_bpmap | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instrument, | |||
const char * | final_prefix | |||
) |
Save BadPixelMap product
frame | Product Frame | |
frameset | Input Frameset | |
parameters | Parameters list | |
recipe_id | Recipe Identification String | |
instrument | Instrument structure | |
final_prefix | Final file name |
Definition at line 2056 of file xsh_dfs.c.
References check, check_msg, xsh_instrument::dictionary, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, xsh_frame_product(), XSH_FREE, xsh_free_image(), xsh_free_propertylist(), xsh_msg_dbg_low, XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_stringcat_any(), and xsh_time_stamp_get().
Referenced by xsh_linear(), xsh_lingain(), xsh_mbias(), xsh_mdark(), xsh_mflat(), and xsh_util_bpmap_nl_raw2pre().
void xsh_add_product_image | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instrument, | |||
const char * | final_prefix | |||
) |
Save Image product
frame | Product Frame | |
frameset | Input Frameset | |
parameters | Parameters list | |
recipe_id | Recipe Identification String | |
instrument | Instrument structure | |
final_prefix | Final file name |
Definition at line 2278 of file xsh_dfs.c.
References check, check_msg, xsh_instrument::dictionary, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, xsh_frame_product(), XSH_FREE, xsh_free_image(), xsh_free_propertylist(), xsh_msg, xsh_pfits_get_arcfile(), XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_stringcat_any(), and xsh_time_stamp_get().
Referenced by xsh_2dmap(), xsh_mbias(), xsh_mdark(), xsh_mflat(), xsh_respon_slit_nod(), xsh_respon_slit_offset(), xsh_respon_slit_stare(), xsh_scired_slit_nod(), xsh_scired_slit_offset(), xsh_scired_slit_stare(), xsh_util_bpmap_coadd(), xsh_util_crh_single(), and xsh_util_physmod().
void xsh_add_product_imagelist | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instrument, | |||
const char * | final_prefix | |||
) |
Save Image product
frame | Product Frame | |
frameset | Input Frameset | |
parameters | Parameters list | |
recipe_id | Recipe Identification String | |
instrument | Instrument structure | |
final_prefix | Final file name |
Definition at line 2167 of file xsh_dfs.c.
References check, check_msg, xsh_instrument::dictionary, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, xsh_frame_product(), XSH_FREE, xsh_free_imagelist(), xsh_free_propertylist(), xsh_msg_dbg_low, XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_stringcat_any(), and xsh_time_stamp_get().
Referenced by xsh_build_ifu_cube(), and xsh_util_ifu_build_cube().
void xsh_add_product_pre | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instr | |||
) |
Add DFS keywords to a product frame.
frame | The product frame | |
frameset | The recipe frameset. | |
parameters | The recipe parameter list | |
recipe_id | The recipe name | |
instr | The instrument settings |
Mandatory DFS keywords are added by calling cpl_dfs_setup_product_header()
The function performs the following steps
Definition at line 1855 of file xsh_dfs.c.
References assure, xsh_pre::binx, xsh_pre::biny, check, xsh_pre::data_header, xsh_instrument::dictionary, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, XSH_FREE, xsh_free_frame(), xsh_free_propertylist(), xsh_pfits_get_arcfile(), xsh_pre_free(), xsh_pre_load(), xsh_pre_save(), XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_stringcat_any(), and xsh_time_stamp_get().
Referenced by xsh_2dmap(), xsh_mbias(), xsh_mdark(), xsh_mflat(), xsh_orderpos(), xsh_predict(), xsh_respon_slit_nod(), xsh_scired_slit_nod(), xsh_scired_slit_stare(), and xsh_wavecal().
void xsh_add_product_pre_3d | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instr | |||
) |
Add 3d product frame.
frame | The product frame | |
frameset | The recipe frameset. | |
parameters | The recipe parameter list | |
recipe_id | The recipe name | |
instr | The instrument settings |
Definition at line 1967 of file xsh_dfs.c.
References assure, check, xsh_pre_3d::data_header, xsh_instrument::dictionary, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, XSH_FREE, xsh_free_frame(), xsh_pre_3d_free(), xsh_pre_3d_load(), xsh_pre_3d_save(), XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_stringcat_any(), and xsh_time_stamp_get().
void xsh_add_product_spectrum | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instr | |||
) |
Save spectrum product
frame | Product Frame | |
frameset | Input Frameset | |
parameters | Parameters list | |
recipe_id | Recipe Identification String | |
instr | Instrument structure |
Definition at line 1749 of file xsh_dfs.c.
References assure, check, xsh_instrument::dictionary, xsh_spectrum::flux_header, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, XSH_FREE, xsh_free_frame(), XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_spectrum_free(), xsh_spectrum_load(), xsh_spectrum_save(), xsh_stringcat_any(), and xsh_time_stamp_get().
Referenced by xsh_respon_slit_nod(), xsh_respon_slit_offset(), xsh_respon_slit_stare(), xsh_scired_slit_nod(), xsh_scired_slit_offset(), and xsh_scired_slit_stare().
void xsh_add_product_table | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instrument | |||
) |
Save Table product.
frame | Product Frame | |
frameset | Input Frameset | |
parameters | Parameters list | |
recipe_id | Recipe Identification String | |
instrument | Instrument structure |
Definition at line 2539 of file xsh_dfs.c.
References check, xsh_instrument::dictionary, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, xsh_frame_product(), XSH_FREE, xsh_free_propertylist(), XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_stringcat_any(), XSH_TABLE_FREE, XSH_TABLE_LOAD, and xsh_time_stamp_get().
Referenced by xsh_2dmap(), xsh_cfg_recover_last_step(), xsh_gain(), xsh_geom_ifu(), xsh_predict(), xsh_respon_slit_nod(), xsh_respon_slit_offset(), xsh_respon_slit_stare(), and xsh_wavecal().
void xsh_add_product_table_multi | ( | cpl_frame * | frame, | |
cpl_frameset * | frameset, | |||
const cpl_parameterlist * | parameters, | |||
const char * | recipe_id, | |||
xsh_instrument * | instrument | |||
) |
Save Table product (input frame has several extensions, 1 table per extension).
frame | Product Frame | |
frameset | Input Frameset | |
parameters | Parameters list | |
recipe_id | Recipe Identification String | |
instrument | Instrument structure |
Definition at line 2415 of file xsh_dfs.c.
References check, xsh_instrument::dictionary, xsh_instrument::pipeline_id, xsh_add_product_file(), XSH_ASSURE_NOT_NULL, xsh_fileutils_move(), xsh_frame_product(), XSH_FREE, xsh_free_propertylist(), xsh_free_table(), XSH_PRODUCT_PREFIX, xsh_sdate_utc(), xsh_stringcat_any(), XSH_TABLE_FREE, and xsh_time_stamp_get().
Referenced by xsh_2dmap(), xsh_build_ifu_cube(), xsh_flexcomp(), xsh_mflat(), xsh_model_first_anneal_save(), xsh_orderpos(), xsh_predict(), xsh_respon_slit_nod(), xsh_respon_slit_offset(), xsh_respon_slit_stare(), xsh_scired_slit_stare(), xsh_util_afc(), xsh_util_efficiency1d(), xsh_util_ifu_build_cube(), and xsh_util_physmod().
cpl_error_code xsh_dfs_extract_calib_frames | ( | cpl_frameset * | input, | |
cpl_frameset * | calib | |||
) |
cpl_error_code xsh_dfs_extract_pro_frames | ( | cpl_frameset * | input, | |
cpl_frameset * | pros | |||
) |
split input sof in groups: raw and calib
input | the input set of files | |
pros | the product files of the input set of files |
Definition at line 1096 of file xsh_dfs.c.
References XSH_ASSURE_NOT_NULL_MSG.
Referenced by xsh_lingain().
cpl_error_code xsh_dfs_extract_raw_frames | ( | cpl_frameset * | input, | |
cpl_frameset * | raws | |||
) |
split input sof in groups: raw and calib
input | the input set of files | |
raws | the raws file of the input set of files |
Definition at line 1045 of file xsh_dfs.c.
Referenced by xsh_model_first_anneal_save().
int xsh_dfs_files_dont_exist | ( | cpl_frameset * | frameset | ) |
Check if all SOF files exist.
frameset | The input set-of-frames |
Definition at line 195 of file xsh_dfs.c.
Referenced by xsh_begin().
void xsh_dfs_filter | ( | cpl_frameset * | set, | |
const char * | tags[], | |||
int | size | |||
) |
filter the frameset with the given tag list
set | [IN/OUT] The input set of frames | |
tags | the filtered tag list | |
size | size of list |
Definition at line 1373 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_ILLEGAL, XSH_ASSURE_NOT_NULL, and xsh_dfs_tag_check().
Referenced by xsh_begin().
void xsh_dfs_find_flat | ( | cpl_frameset * | raws, | |
cpl_frameset * | flat | |||
) |
xsh_instrument* xsh_dfs_set_groups | ( | cpl_frameset * | set | ) |
Set the group as RAW or CALIB in a frameset and return the instrument detected.
set | the input frameset |
Definition at line 973 of file xsh_dfs.c.
References assure, check, check_msg, xsh_instrument::config, instrument, XSH_INSTRCONFIG::order_max, XSH_INSTRCONFIG::order_min, XSH_INSTRCONFIG::orders, XSH_ARM_UNDEFINED, xsh_instrument_arm_tostring(), xsh_instrument_free(), xsh_instrument_get_arm(), xsh_instrument_get_config(), xsh_instrument_mode_tostring(), xsh_instrument_new(), xsh_instrument_parse_tag(), XSH_IS_CALIB, XSH_IS_RAW, xsh_msg, and xsh_msg_error.
Referenced by main(), xsh_begin(), xsh_util_bpmap_coadd(), and xsh_util_ima_arith().
void xsh_dfs_split_in_group | ( | cpl_frameset * | input, | |
cpl_frameset * | raws, | |||
cpl_frameset * | calib | |||
) |
split input sof in groups: raw and calib
input | the input set of files | |
raws | the raws file of the input set of files | |
calib | the calib files of the input set of files |
Definition at line 1122 of file xsh_dfs.c.
References xsh_msg_error.
Referenced by main(), and xsh_begin().
void xsh_dfs_split_nir | ( | cpl_frameset * | input, | |
cpl_frameset ** | on, | |||
cpl_frameset ** | off | |||
) |
split input RAW NIR sof in ON and OFF
[in] | input | the input RAW NIR set of files |
[out] | on | the on files of the input set of files |
[out] | off | the off files of the input set of files |
Definition at line 1213 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_free_frame(), xsh_free_frameset(), xsh_msg_error, and XSH_NEW_FRAMESET.
Referenced by xsh_2dmap(), xsh_geom_ifu(), xsh_mflat(), xsh_predict(), xsh_scired_ifu_stare(), and xsh_wavecal().
int xsh_dfs_split_offset | ( | cpl_frameset * | input, | |
const char * | object_tag, | |||
const char * | sky_tag, | |||
cpl_frameset ** | object, | |||
cpl_frameset ** | sky | |||
) |
split input RAW offset sof in OBJECT_... and SKY_... framesets
[in] | input | input frameset |
[in] | object_tag | The OBJECT Tag |
[in] | sky_tag | The SKY Tag |
[out] | object | the object files of the input set of files |
[out] | sky | the sky files of the input set of files |
Definition at line 1273 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_ILLEGAL, XSH_ASSURE_NOT_NULL, xsh_free_frame(), xsh_msg_dbg_medium, xsh_msg_error, and xsh_print_rec_status().
Referenced by xsh_respon_slit_offset(), xsh_scired_ifu_offset(), and xsh_scired_slit_offset().
void xsh_dfs_split_qth_d2 | ( | cpl_frameset * | input, | |
cpl_frameset ** | qth, | |||
cpl_frameset ** | d2 | |||
) |
Extracts QTH and D2 frames from input frameset.
input | the input set of files | |
qth | frameset with QTH frames | |
d2 | frameset with D2 frames |
Definition at line 1158 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_free_frame(), xsh_free_frameset(), xsh_msg_error, and XSH_NEW_FRAMESET.
Referenced by xsh_mflat().
static bool xsh_dfs_tag_check | ( | const char * | tag, | |
const char * | tag_list[], | |||
int | size | |||
) | [static] |
check if the tag is in the tag list
tag | the tag to check | |
tag_list | the list of tags | |
size | size of list |
Definition at line 1348 of file xsh_dfs.c.
Referenced by xsh_dfs_filter().
cpl_error_code xsh_ensure_raws_input_offset_recipe_is_proper | ( | cpl_frameset * | raws, | |
xsh_instrument * | instrument | |||
) |
Make sure input frames is an even number (eventually removes the last from the input list).
raws | input value | |
instrument | arm setting |
Definition at line 301 of file xsh_dfs.c.
References assure, check, xsh_frameset_extract(), xsh_frameset_merge(), xsh_free_frameset(), XSH_GET_TAG_FROM_ARM, xsh_instrument_get_mode(), XSH_MODE_IFU, xsh_msg, XSH_OBJECT_IFU_OFFSET, XSH_OBJECT_SLIT_OFFSET, XSH_SKY_IFU, XSH_SKY_SLIT, XSH_STD_FLUX_IFU_OFFSET, and XSH_STD_FLUX_SLIT_OFFSET.
Referenced by xsh_respon_slit_offset(), xsh_scired_ifu_offset(), and xsh_scired_slit_offset().
cpl_error_code xsh_ensure_raws_number_is_even | ( | cpl_frameset * | raws | ) |
Make sure input frames is an even number (eventually removes the last from the input list).
raws | input value |
Definition at line 734 of file xsh_dfs.c.
References check, xsh_free_propertylist(), xsh_get_offsety(), and xsh_msg_warning.
Referenced by xsh_respon_slit_nod(), and xsh_scired_slit_nod().
cpl_frameset* xsh_extract_nod_pairs | ( | cpl_frameset * | raws, | |
cpl_vector * | offset | |||
) |
Make sure input frames is composed by nod a-b sequence.
raws | input value | |
offset | vector with different offset values |
Definition at line 531 of file xsh_dfs.c.
References assure, check, XSH_ASSURE_NOT_NULL_MSG, xsh_frameset_extract_offsety_matches(), xsh_frameset_extract_offsety_mismatches(), xsh_free_frameset(), xsh_free_propertylist(), xsh_msg, and xsh_pfits_get_mjdobs().
cpl_frameset* xsh_extract_obj_and_sky_pairs | ( | cpl_frameset * | raws, | |
xsh_instrument * | instrument | |||
) |
Make sure input frames is composed by obj-sky pairs.
raws | input value | |
instrument | arm |
Definition at line 645 of file xsh_dfs.c.
References assure, check, xsh_frameset_extract(), xsh_free_frameset(), xsh_free_propertylist(), XSH_GET_TAG_FROM_ARM, xsh_instrument_get_mode(), XSH_MODE_IFU, xsh_msg, XSH_OBJECT_IFU_OFFSET, XSH_OBJECT_SLIT_OFFSET, xsh_pfits_get_mjdobs(), XSH_SKY_IFU, and XSH_SKY_SLIT.
int xsh_file_exists | ( | const char * | filename | ) |
Definition at line 892 of file xsh_dfs.c.
Referenced by xsh_frameset_extract_pre().
cpl_frame* xsh_find_arc_line_list | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find an arc line list frame.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3236 of file xsh_dfs.c.
References check, XSH_ARC_LINE_LIST, XSH_ASSURE_NOT_NULL, xsh_find_frame(), and XSH_GET_TAG_FROM_ARM.
Referenced by main(), and xsh_predict().
cpl_frame* xsh_find_arc_line_list_clean | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find an arc lines list clean frame.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3210 of file xsh_dfs.c.
References check, XSH_ARC_LINE_LIST, XSH_ASSURE_NOT_NULL, xsh_find_frame(), and XSH_GET_TAG_FROM_ARM.
cpl_frame* xsh_find_bpmap | ( | cpl_frameset * | set | ) |
find the bad pixel map in a set of files
set | the set of files |
Definition at line 1452 of file xsh_dfs.c.
Referenced by main(), and xsh_linear().
cpl_frame* xsh_find_calpro_model_config | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find model config frame.
frames | The input frameset | |
instr | the instrument arm setting |
Definition at line 3504 of file xsh_dfs.c.
References check, xsh_find_frame(), xsh_instrument_arm_tostring(), XSH_MOD_CFG, xsh_msg_debug, and xsh_stringcat_any().
Referenced by xsh_model_anneal().
cpl_frame* xsh_find_calpro_model_meas_coord | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find model config frame.
frames | The input frameset | |
instr | the instrument arm setting |
Definition at line 3558 of file xsh_dfs.c.
References check, xsh_find_frame(), xsh_instrument_arm_tostring(), XSH_MEASCOORD, and xsh_stringcat_any().
Referenced by xsh_model_anneal().
cpl_frame* xsh_find_disp_tab | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find Dispersol tab frame. The frame returned should not be free by the caller.
frames | The input frameset | |
instr | The instrument |
Definition at line 3383 of file xsh_dfs.c.
References check, XSH_DISP_TAB, XSH_DISP_TAB_AFC, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and xsh_msg.
Referenced by main(), xsh_geom_ifu(), xsh_respon_slit_offset(), xsh_respon_slit_stare(), xsh_scired_ifu_stare(), xsh_scired_slit_nod_get_calibs(), xsh_scired_slit_offset(), xsh_scired_slit_stare(), and xsh_wavecal().
static cpl_frame * xsh_find_frame | ( | cpl_frameset * | frames, | |
const char * | tags[] | |||
) | [static] |
Find a frame.
frames | The input frameset | |
tags | Null-terminated array of tags to search for |
The function sets an error if no standard star frame is present.
Definition at line 3664 of file xsh_dfs.c.
References assure, check, xsh_msg_warning, xsh_stringcat_3(), and xsh_stringdup().
Referenced by xsh_find_arc_line_list(), xsh_find_arc_line_list_clean(), xsh_find_calpro_model_config(), xsh_find_calpro_model_meas_coord(), xsh_find_disp_tab(), xsh_find_frame_with_tag(), xsh_find_master_bias(), xsh_find_master_dark(), xsh_find_master_flat(), xsh_find_model_config(), xsh_find_model_config_open(), xsh_find_model_config_tab(), xsh_find_model_testpar(), xsh_find_model_wavelist(), xsh_find_order_tab_centr(), xsh_find_order_tab_edges(), xsh_find_order_tab_guess(), xsh_find_order_tab_recov(), xsh_find_raw_arc_slit_nir_off(), xsh_find_raw_arc_slit_nir_on(), xsh_find_raw_arc_slit_uvb_vis(), xsh_find_raw_orderdef_nir(), xsh_find_raw_orderdef_nir_off(), xsh_find_raw_orderdef_vis_uvb(), xsh_find_slitmap(), xsh_find_spectral_format(), xsh_find_std_flux(), xsh_find_std_star_flux(), xsh_find_theo_tab_mode(), xsh_find_theo_tab_mult(), xsh_find_theo_tab_sing(), xsh_find_usr_lines_guess_tab(), xsh_find_wave_tab(), xsh_find_wave_tab_2d(), xsh_find_wave_tab_guess(), xsh_find_wave_tab_ifu(), and xsh_find_wavemap().
cpl_frame* xsh_find_frame_with_tag | ( | cpl_frameset * | frames, | |
const char * | tag, | |||
xsh_instrument * | instr | |||
) |
Find frame with a given tag.
frames | The input frameset | |
tag | The frame tag | |
instr | the settings of instrument |
The function sets an error if no standard star frame is present.
Definition at line 2728 of file xsh_dfs.c.
References xsh_find_frame(), xsh_get_tag_from_arm(), and xsh_msg_dbg_high.
Referenced by main(), xsh_2dmap(), xsh_cfg_recover_last_step(), xsh_check_load_master_bpmap(), xsh_flexcomp(), xsh_lingain(), xsh_load_ref_table(), xsh_mdark(), xsh_mflat(), xsh_model_first_anneal(), xsh_orderpos(), xsh_predict(), xsh_respon_slit_nod(), xsh_respon_slit_offset(), xsh_respon_slit_stare(), xsh_scired_ifu_offset(), xsh_scired_ifu_stare(), xsh_scired_slit_nod_get_calibs(), xsh_scired_slit_offset(), xsh_scired_slit_stare(), xsh_slit_offset_get_calibs(), xsh_slit_stare_get_calibs(), xsh_util_afc(), xsh_util_apply_response(), xsh_util_bpmap_nl_raw2pre(), xsh_util_compute_response(), xsh_util_efficiency1d(), xsh_util_efficiency2d(), xsh_util_guess_xy(), xsh_util_ifu_build_cube(), xsh_util_integrate(), xsh_util_physmod(), xsh_utils_efficiency(), and xsh_wavecal().
cpl_frame* xsh_find_master_bias | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find master bias frame.
frames | The input frameset | |
instr | the settings of instrument |
The function sets an error if no standard star frame is present.
Definition at line 2700 of file xsh_dfs.c.
References check, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_MASTER_BIAS.
Referenced by main(), xsh_geom_ifu(), xsh_mflat(), xsh_scired_ifu_stare(), xsh_scired_slit_nod_get_calibs(), and xsh_slit_stare_get_calibs().
cpl_frame* xsh_find_master_bpmap | ( | cpl_frameset * | set | ) |
find the master bad pixel map in a set of files
set | the set of files |
Definition at line 1475 of file xsh_dfs.c.
References XSH_MASTER_BP_MAP.
Referenced by xsh_2dmap(), xsh_cfg_recover_last_step(), xsh_geom_ifu(), xsh_orderpos(), xsh_predict(), xsh_scired_ifu_offset(), xsh_scired_ifu_stare(), xsh_scired_slit_nod_get_calibs(), xsh_slit_offset_get_calibs(), xsh_slit_stare_get_calibs(), and xsh_wavecal().
cpl_frame* xsh_find_master_dark | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find master dark frame.
frames | The input frameset | |
instr | the settings of instrument |
The function sets an error if no standard star frame is present.
Definition at line 2785 of file xsh_dfs.c.
References xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_MASTER_DARK.
Referenced by main(), xsh_geom_ifu(), xsh_mflat(), xsh_scired_ifu_stare(), xsh_slit_stare_get_calibs(), and xsh_wavecal().
cpl_frame* xsh_find_master_flat | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find master flat frame.
frames | The input frameset | |
instr | the settings of instrument |
The function sets an error if no standard star frame is present.
Definition at line 2807 of file xsh_dfs.c.
References xsh_find_frame(), XSH_GET_TAG_FROM_MODE, and XSH_MASTER_FLAT.
Referenced by main(), xsh_geom_ifu(), xsh_scired_ifu_offset(), xsh_scired_ifu_stare(), xsh_scired_slit_nod_get_calibs(), xsh_slit_offset_get_calibs(), and xsh_slit_stare_get_calibs().
cpl_frame* xsh_find_model_config | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a model config.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3108 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, XSH_MOD_CFG_OPT_2D, XSH_MOD_CFG_OPT_AFC, and XSH_MOD_CFG_TAB.
Referenced by xsh_geom_ifu(), and xsh_util_ifu_build_cube().
cpl_frame* xsh_find_model_config_open | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find model config frame.
frames | The input frameset | |
instr | the instrument arm setting |
Definition at line 3531 of file xsh_dfs.c.
References check, xsh_find_frame(), xsh_instrument_arm_tostring(), XSH_MOD_CFG_OPEN, xsh_msg_debug, and xsh_stringcat_any().
cpl_frame* xsh_find_model_config_tab | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a model configuration table frame.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3285 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_MOD_CFG_TAB.
Referenced by main().
cpl_frame* xsh_find_model_testpar | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find model test parameter list.
frames | The input frameset | |
instr | the instrument arm setting |
Definition at line 3610 of file xsh_dfs.c.
References check, xsh_find_frame(), xsh_instrument_arm_tostring(), XSH_MODEL_TEST_PAR, and xsh_stringcat_any().
Referenced by xsh_model().
cpl_frame* xsh_find_model_wavelist | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find model wavelength list frame.
frames | The input frameset | |
instr | the instrument arm setting |
Definition at line 3583 of file xsh_dfs.c.
References check, xsh_find_frame(), xsh_instrument_arm_tostring(), XSH_MODEL_WAVE_LIST, and xsh_stringcat_any().
Referenced by xsh_model().
cpl_frame* xsh_find_off | ( | cpl_frameset * | set | ) |
cpl_frame* xsh_find_on | ( | cpl_frameset * | set | ) |
cpl_frame* xsh_find_order_tab_centr | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find an order tab CENTR.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 2951 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_ORDER_TAB_CENTR.
Referenced by xsh_mflat().
cpl_frame* xsh_find_order_tab_edges | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find an order tab EDGES.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 2976 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_LAMP, XSH_GET_TAG_FROM_MODE, xsh_msg_dbg_medium, XSH_ORDER_TAB_AFC, and XSH_ORDER_TAB_EDGES.
Referenced by main(), xsh_2dmap(), xsh_flexcomp(), xsh_geom_ifu(), xsh_scired_ifu_offset(), xsh_scired_ifu_stare(), xsh_scired_slit_nod_get_calibs(), xsh_slit_offset_get_calibs(), xsh_slit_stare_get_calibs(), and xsh_wavecal().
cpl_frame* xsh_find_order_tab_guess | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find an order tab GUESS.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 2926 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_ORDER_TAB_GUESS.
cpl_frame* xsh_find_order_tab_recov | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find an order tab RECOV.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 2901 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_ORDER_TAB_RECOV.
cpl_frame* xsh_find_raw_arc_slit_nir_off | ( | cpl_frameset * | frames | ) |
Find raw frame for Slit NIR OFF.
frames | The input frameset |
Definition at line 3482 of file xsh_dfs.c.
References check, XSH_ARC_SLIT_OFF, xsh_find_frame(), and xsh_stringcat_any().
cpl_frame* xsh_find_raw_arc_slit_nir_on | ( | cpl_frameset * | frames | ) |
Find raw frame for Slit NIR ON.
frames | The input frameset |
Definition at line 3462 of file xsh_dfs.c.
References check, XSH_ARC_SLIT_NIR, xsh_find_frame(), and xsh_stringcat_any().
cpl_frame* xsh_find_raw_arc_slit_uvb_vis | ( | cpl_frameset * | frames, | |
XSH_ARM | arm | |||
) |
Find raw frame for Slit UVB/VIS.
frames | The input frameset | |
arm | The ARM (UVB or VIS) |
Definition at line 3436 of file xsh_dfs.c.
References check, XSH_ARC_SLIT_UVB, XSH_ARC_SLIT_VIS, XSH_ARM_UVB, XSH_ARM_VIS, xsh_find_frame(), and xsh_stringcat_any().
cpl_frame* xsh_find_raw_orderdef_nir | ( | cpl_frameset * | frames | ) |
Find orderdef raw frame for NIR.
frames | The input frameset |
Definition at line 3360 of file xsh_dfs.c.
References check, xsh_find_frame(), XSH_ORDERDEF_NIR, and xsh_stringcat_any().
Referenced by xsh_orderpos().
cpl_frame* xsh_find_raw_orderdef_nir_off | ( | cpl_frameset * | frames | ) |
Find orderdef raw frame for NIR OFF.
frames | The input frameset |
Definition at line 3416 of file xsh_dfs.c.
References check, xsh_find_frame(), XSH_ORDERDEF_OFF, and xsh_stringcat_any().
Referenced by xsh_orderpos().
cpl_frame* xsh_find_raw_orderdef_vis_uvb | ( | cpl_frameset * | frames | ) |
Find orderdef raw frame for UVB or VIS.
frames | The input frameset |
Definition at line 3333 of file xsh_dfs.c.
References check, xsh_find_frame(), XSH_ORDERDEF_D2_UVB, XSH_ORDERDEF_QTH_UVB, XSH_ORDERDEF_VIS, and xsh_stringcat_any().
Referenced by xsh_orderpos().
cpl_frame* xsh_find_slitmap | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a slit map.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3053 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, XSH_IFU_MAP, and XSH_SLIT_MAP.
Referenced by main(), xsh_check_get_map(), xsh_geom_ifu(), xsh_scired_ifu_offset(), xsh_scired_ifu_stare(), xsh_slit_stare_get_maps(), and xsh_wavecal().
cpl_frame* xsh_find_spectral_format | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find spectral format frame.
frames | The input frameset | |
instr | the instrument arm setting |
Definition at line 3636 of file xsh_dfs.c.
References check, xsh_find_frame(), xsh_instrument_arm_tostring(), XSH_SPECTRAL_FORMAT, and xsh_stringcat_any().
Referenced by main(), xsh_geom_ifu(), xsh_scired_ifu_offset(), xsh_scired_ifu_stare(), xsh_scired_slit_nod_get_calibs(), xsh_slit_offset_get_calibs(), and xsh_wavecal().
cpl_frame* xsh_find_std_flux | ( | cpl_frameset * | frames | ) |
Find standard star frame.
frames | The input frameset |
The function sets an error if no standard star frame is present.
Definition at line 2643 of file xsh_dfs.c.
References XSH_ARM_NIR, XSH_ARM_UVB, XSH_ARM_VIS, xsh_find_frame(), XSH_STD_FLUX_OFFSET, XSH_STD_FLUX_SLIT, XSH_STD_TELL_OFFSET, and XSH_STD_TELL_SLIT.
Referenced by xsh_respon_slit_stare().
cpl_frame* xsh_find_std_star_flux | ( | cpl_frameset * | frames | ) |
Find standard standard star flux frame.
frames | The input frameset |
The function sets an error if no standard star frame is present.
Definition at line 2675 of file xsh_dfs.c.
References XSH_ARM_NIR, XSH_ARM_UVB, XSH_ARM_VIS, xsh_find_frame(), and XSH_STD_STAR_FLUX.
cpl_frame* xsh_find_theo_tab_mode | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a theoretical tab IFU or SINg depending of MODE in SOF.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 2871 of file xsh_dfs.c.
References check, xsh_instrument::mode, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, XSH_MODE_IFU, XSH_THEO_TAB_IFU, and XSH_THEO_TAB_SING.
cpl_frame* xsh_find_theo_tab_mult | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a theoretical tab multi pinhole in SOF.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 2849 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_THEO_TAB_MULT.
cpl_frame* xsh_find_theo_tab_sing | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a theoretical tab signle pinhole in SOF.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 2826 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_THEO_TAB_SING.
cpl_frame* xsh_find_usr_lines_guess_tab | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a user guess line positions table frame.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3260 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_GUESS_LINES_POS.
cpl_frame* xsh_find_wave_tab | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a wave tab 2D or a wave tab ARC.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3079 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, XSH_GET_TAG_FROM_MODE, XSH_WAVE_TAB_2D, XSH_WAVE_TAB_AFC, and XSH_WAVE_TAB_ARC.
Referenced by xsh_flexcomp(), xsh_scired_slit_nod_get_calibs(), xsh_slit_offset_get_calibs(), and xsh_slit_stare_get_calibs().
cpl_frame* xsh_find_wave_tab_2d | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a wave tab 2D.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3030 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_WAVE_TAB_2D.
Referenced by main(), and xsh_wavecal().
cpl_frame* xsh_find_wave_tab_guess | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find a wave tab guess.
frames | The input frameset where we do the search | |
instr | The instrument |
Definition at line 3005 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_WAVE_TAB_GUESS.
cpl_frameset* xsh_find_wave_tab_ifu | ( | cpl_frameset * | frames, | |
xsh_instrument * | instrument | |||
) |
Find wave tab ARC (for IFU 3 frames).
frames | The input frameset where we do the search | |
instrument | The instrument |
Definition at line 3136 of file xsh_dfs.c.
References check, XSH_ASSURE_NOT_NULL, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, xsh_msg, xsh_msg_warning, XSH_WAVE_TAB_2D, XSH_WAVE_TAB_AFC, XSH_WAVE_TAB_ARC_CEN_IFU, XSH_WAVE_TAB_ARC_DOWN_IFU, and XSH_WAVE_TAB_ARC_UP_IFU.
Referenced by main(), and xsh_geom_ifu().
cpl_frame* xsh_find_wavemap | ( | cpl_frameset * | frames, | |
xsh_instrument * | instr | |||
) |
Find Wave Map frame. The frame returned should not be free by the caller.
frames | The input frameset | |
instr | the instrument |
Definition at line 3311 of file xsh_dfs.c.
References check, xsh_find_frame(), XSH_GET_TAG_FROM_ARM, and XSH_WAVE_MAP.
Referenced by main(), xsh_check_get_map(), xsh_geom_ifu(), xsh_scired_ifu_offset(), xsh_scired_ifu_stare(), xsh_scired_slit_nod_get_calibs(), xsh_slit_offset_get_calibs(), xsh_slit_stare_get_maps(), and xsh_wavecal().
void xsh_frame_config | ( | const char * | fname, | |
const char * | tag, | |||
cpl_frame_type | type, | |||
cpl_frame_group | group, | |||
cpl_frame_level | level, | |||
cpl_frame ** | frame | |||
) |
Define a frame characteristics.
fname | frame filename | |
tag | frame tag | |
type | frame type | |
group | frame group | |
level | frame level | |
frame | output frame |
Definition at line 833 of file xsh_dfs.c.
References check.
Referenced by xsh_cfg_recover_model_THE_create(), xsh_frame_product(), xsh_util_physmod_model_THE_create(), and xsh_wavelist_subtract_sky().
cpl_frame* xsh_frame_product | ( | const char * | fname, | |
const char * | tag, | |||
cpl_frame_type | type, | |||
cpl_frame_group | group, | |||
cpl_frame_level | level | |||
) |
Creates a frame with given characteristics.
fname | frame filename | |
tag | frame tag | |
type | frame type | |
group | frame group | |
level | frame level |
Definition at line 863 of file xsh_dfs.c.
References check, xsh_frame_config(), and xsh_free_frame().
Referenced by xsh_add_product(), xsh_add_product_bpmap(), xsh_add_product_image(), xsh_add_product_imagelist(), xsh_add_product_table(), xsh_add_product_table_multi(), xsh_arclist_save(), xsh_build_ifu_cube(), xsh_catalog_extract_spectrum_frame(), xsh_cfg_recover_gen_xyg_frame(), xsh_compute_linearity(), xsh_compute_noise_map(), xsh_compute_response(), xsh_compute_response_ord(), xsh_create_master_bpmap(), xsh_cube_qc_trace_window(), xsh_dispersol_list_save(), xsh_dispersol_list_to_slitmap(), xsh_dispersol_list_to_wavemap(), xsh_efficiency_compute(), xsh_flat_merge_qth_d2(), xsh_frame_image_ext_qc_trace_window(), xsh_frame_image_qc_trace_window(), xsh_frameset_average(), xsh_frameset_average_pre(), xsh_image_get_hot_cold_pixs(), xsh_image_local_cold_pixs(), xsh_image_local_hot_pixs(), xsh_image_mflat_detect_hotcold(), xsh_linetilt_list_save(), xsh_localization_save(), xsh_mdark(), xsh_mflat(), xsh_model_first_anneal(), xsh_model_first_anneal_save(), xsh_model_maps_create(), xsh_model_pipe_anneal(), xsh_model_spectralformat_create(), xsh_model_THE_create(), xsh_normalize_spectrum(), xsh_normalize_spectrum_ord(), xsh_order_list_save(), xsh_rec_list_save(), xsh_rec_list_save2(), xsh_rec_list_save_table(), xsh_resid_order_save(), xsh_resid_tab_save(), xsh_shift_tab_save(), xsh_slice_offset_save(), xsh_spectrum1D_save(), xsh_spectrum_interpolate(), xsh_spectrum_interpolate_linear(), xsh_spectrum_resample(), xsh_star_flux_list_save(), xsh_star_flux_list_save_order(), xsh_subtract_background(), xsh_the_map_save(), xsh_util_afc(), xsh_util_bpmap_coadd(), xsh_util_crh_single(), xsh_util_frameset_collapse_mean(), xsh_util_ifu_build_cube(), xsh_util_model_SPF_create(), xsh_util_multiply_by_response(), xsh_util_multiply_by_response_ord(), xsh_utils_efficiency(), xsh_wavemap_list_save(), xsh_wavemap_list_save2(), and xsh_wavesol_save().
cpl_frameset* xsh_frameset_drl_frames | ( | cpl_frameset * | set | ) |
extract DRL specific frames from frameset
set | input frameset |
Definition at line 268 of file xsh_dfs.c.
References check, xsh_free_propertylist(), and xsh_pfits_get_naxis().
Referenced by xsh_merge_ord_ifu().
cpl_frameset* xsh_frameset_ext_image_frames | ( | cpl_frameset * | set | ) |
Extract frameset sub set containing only table frames.
set | input frameset |
Definition at line 235 of file xsh_dfs.c.
References check, xsh_free_propertylist(), and xsh_pfits_get_naxis().
cpl_frameset* xsh_frameset_ext_table_frames | ( | cpl_frameset * | set | ) |
Extract frameset sub set containing only table frames.
set | input frameset |
Definition at line 157 of file xsh_dfs.c.
References check, xsh_free_propertylist(), and xsh_pfits_get_naxis().
Referenced by xsh_respon_slit_offset(), and xsh_scired_slit_offset().
cpl_frameset* xsh_frameset_extract | ( | const cpl_frameset * | frames, | |
const char * | tag | |||
) |
Extract frames with given tag from frameset.
frames | frame set | |
tag | to search for |
Definition at line 914 of file xsh_dfs.c.
References assure.
Referenced by xsh_cfg_recover_last_step(), xsh_ensure_raws_input_offset_recipe_is_proper(), xsh_extract_obj_and_sky_pairs(), xsh_gain(), xsh_lingain_pre_format(), xsh_util_ima_arith(), and xsh_util_ima_shift().
cpl_frameset* xsh_frameset_extract_offsety_matches | ( | cpl_frameset * | raws, | |
const double | offset | |||
) |
Extract frames that has same cumoffy as offset.
raws | input value | |
offset | offset value |
Definition at line 432 of file xsh_dfs.c.
References XSH_ASSURE_NOT_NULL_MSG, xsh_free_propertylist(), and xsh_get_offsety().
Referenced by xsh_extract_nod_pairs().
cpl_frameset* xsh_frameset_extract_offsety_mismatches | ( | cpl_frameset * | raws, | |
const double | offset | |||
) |
Extract frames that has different cumoffy than offset.
raws | input value | |
offset | offset value |
Definition at line 474 of file xsh_dfs.c.
References M_PI, XSH_ASSURE_NOT_NULL_MSG, xsh_free_propertylist(), xsh_msg, XSH_NOD_CUMULATIVE_OFFSETY, xsh_pfits_get_cumoffsety(), xsh_pfits_get_dec_cumoffset(), xsh_pfits_get_posang(), and xsh_pfits_get_ra_cumoffset().
Referenced by xsh_extract_nod_pairs().
cpl_frameset* xsh_frameset_extract_pre | ( | cpl_frameset * | frameset, | |
const char * | prefix | |||
) |
Extracts pre frames from a frameset.
frameset | the set of files | |
prefix | the pre frame prefix |
Definition at line 1413 of file xsh_dfs.c.
References check, and xsh_file_exists().
Referenced by xsh_lingain_pre_format().
cpl_error_code xsh_frameset_merge | ( | cpl_frameset * | set1, | |
cpl_frameset * | set2 | |||
) |
Extracts raw frames.
set1 | The input frameset that is extended | |
set2 | The input frameset that is merged to set1 |
Definition at line 945 of file xsh_dfs.c.
References check, and passure.
Referenced by xsh_ensure_raws_input_offset_recipe_is_proper(), and xsh_lingain().
static double xsh_get_offsety | ( | cpl_propertylist * | plist | ) | [static] |
Computes offsety.
plist | propertylist |
Definition at line 395 of file xsh_dfs.c.
References M_PI, xsh_msg, XSH_NOD_CUMULATIVE_OFFSETY, xsh_pfits_get_cumoffsety(), xsh_pfits_get_dec_cumoffset(), xsh_pfits_get_posang(), and xsh_pfits_get_ra_cumoffset().
Referenced by xsh_ensure_raws_number_is_even(), and xsh_frameset_extract_offsety_matches().
char* xsh_get_tag_from_arm | ( | const char * | tag, | |
xsh_instrument * | instr | |||
) |
Find arm specific tag from base and instrument setting.
tag | The frame tag | |
instr | the settings of instrument |
Definition at line 2755 of file xsh_dfs.c.
References xsh_instrument_arm_tostring(), and xsh_msg_dbg_high.
Referenced by xsh_cfg_recover_last_step(), xsh_cfg_recover_measure_line_xy(), xsh_find_frame_with_tag(), and xsh_model_first_anneal_save().
int xsh_parameter_get_default_flag | ( | const cpl_parameter * | p | ) |
Check if an input parameter has been changed by the user.
p | input parameter |
Definition at line 76 of file xsh_dfs.c.
References xsh_msg_error.
Referenced by xsh_params_set_defaults(), and xsh_scired_nod_params_set_defaults().
int xsh_print_rec_status | ( | const int | val | ) |
Check if an error has happened and returns error kind and location.
val | input value |
Definition at line 810 of file xsh_dfs.c.
References xsh_msg_error.
Referenced by xsh_cfg_recover_extend_xy_pos_frm(), xsh_cfg_recover_guess_tab_corr_by_ordpos(), xsh_cfg_recover_last_step(), xsh_cfg_recover_measure_line_xy(), xsh_cfg_recover_measure_line_xy_fit(), xsh_cfg_recover_model_THE_create(), xsh_dfs_split_offset(), xsh_model_refining_detect(), xsh_response_calculate(), xsh_util_model_SPF_create(), and xsh_util_physmod_model_THE_create().
char* xsh_unique_filename | ( | const char * | context, | |
const char * | caller_id, | |||
const char * | pro_catg | |||
) |
Get unique product filename.
context | The current context, or NULL | |
caller_id | Name of calling module | |
pro_catg | The PROduct CATeGory |
This function can be used to avoid overwriting existing files. It computes the filename depending on the current context (position in the call-tree).
If this turns out not to be a problem, one could simply use pro_catg.fits as the filename.
Definition at line 1581 of file xsh_dfs.c.
References xsh_stringcat_4(), and xsh_stringcat_6().
cpl_error_code xsh_validate_model_cfg | ( | cpl_frame * | mod, | |
cpl_frameset * | set | |||
) |
Validate model cfg.
mod | model cfg frame | |
set | input frameset |
Definition at line 119 of file xsh_dfs.c.
References check, xsh_msg_warning, and xsh_pfits_get_mjdobs().